9 publications
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Artificial Metalloproteins Containing Co4O4 Cubane Active Sites
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J. Am. Chem. Soc. 2018, 140, 2739-2742, 10.1021/jacs.7b13052
Artificial metalloproteins (ArMs) containing Co4O4 cubane active sites were constructed via biotin–streptavidin technology. Stabilized by hydrogen bonds (H-bonds), terminal and cofacial CoIII–OH2 moieties are observed crystallographically in a series of immobilized cubane sites. Solution electrochemistry provided correlations of oxidation potential and pH. For variants containing Ser and Phe adjacent to the metallocofactor, 1e–/1H+ chemistry predominates until pH 8, above which the oxidation becomes pH-independent. Installation of Tyr proximal to the Co4O4 active site provided a single H-bond to one of a set of cofacial CoIII–OH2 groups. With this variant, multi-e–/multi-H+ chemistry is observed, along with a change in mechanism at pH 9.5 that is consistent with Tyr deprotonation. With structural similarities to both the oxygen-evolving complex of photosystem II (H-bonded Tyr) and to thin film water oxidation catalysts (Co4O4 core), these findings bridge synthetic and biological systems for water oxidation, highlighting the importance of secondary sphere interactions in mediating multi-e–/multi-H+ reactivity.
Metal: CoHost protein: Streptavidin (Sav)Anchoring strategy: SupramolecularOptimization: Chemical & geneticNotes: Co-complex in Sav WT
Metal: CoHost protein: Streptavidin (Sav)Anchoring strategy: SupramolecularOptimization: Chemical & geneticNotes: Co-complex in Sav S112Y
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A Structural View of Synthetic Cofactor Integration into [FeFe]-Hydrogenases
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Chem. Sci. 2016, 7, 959-968, 10.1039/C5SC03397G
Crystal structures of semisynthetic [FeFe]-hydrogenases with variations in the [2Fe] cluster show little structural differences despite strong effects on activity.
Metal: FeHost protein: [FeFe]-hydrogenase from C. pasteurianum (CpI)Anchoring strategy: DativeOptimization: ChemicalNotes: H2 evolution activity of the ArM: 2874 (mmol H2)*min-1*(mg protein)-1.
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Asymmetric δ-Lactam Synthesis with a Monomeric Streptavidin Artificial Metalloenzyme
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J. Am. Chem. Soc. 2019, 141, 4815-4819, 10.1021/jacs.9b01596
Reliable design of artificial metalloenzymes (ArMs) to access transformations not observed in nature remains a long-standing and important challenge. We report that a monomeric streptavidin (mSav) Rh(III) ArM permits asymmetric synthesis of α,β-unsaturated-δ-lactams via a tandem C–H activation and [4+2] annulation reaction. These products are readily derivatized to enantioenriched piperidines, the most common N-heterocycle found in FDA approved pharmaceuticals. Desired δ-lactams are achieved in yields as high as 99% and enantiomeric excess of 97% under aqueous conditions at room temperature. Embedding a Rh cyclopentadienyl (Cp*) catalyst in the active site of mSav results in improved stereocontrol and a 7-fold enhancement in reactivity relative to the isolated biotinylated Rh(III) cofactor. In addition, mSav-Rh outperforms its well-established tetrameric forms, displaying 11–33 times more reactivity.
Metal: RhHost protein: Streptavidin (monmeric)Anchoring strategy: SupramolecularOptimization: Chemical & geneticNotes: ---
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Chalcogenide Substitution in the [2Fe] Cluster of [FeFe]-Hydrogenases Conserves High Enzymatic Activity
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Dalton Trans. 2017, 46, 16947-16958, 10.1039/C7DT03785F
Combination of biological and chemical methods allow for creation of [FeFe]-hydrogenases with an artificial synthetic cofactor.
Metal: FeHost protein: [FeFe]-hydrogenase from C. pasteurianum (CpI)Anchoring strategy: DativeOptimization: ChemicalNotes: ---
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Diruthenium Diacetate-Catalyzed Aerobic Oxidation of Hydroxylamines and Improved Chemoselectivity by Immobilization to Lysozyme
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ChemCatChem 2017, 9, 4225-4230, 10.1002/cctc.201701083
A new green method for the preparation of nitrones through the aerobic oxidation of the corresponding N,N‐disubstituted hydroxylamines has been developed upon exploring the catalytic activity of a diruthenium catalyst, that is, [Ru2(OAc)4Cl]), in aqueous or alcoholic solution under mild reaction conditions (0.1 to 1 mol % catalyst, air, 50 °C) and reasonable reaction times. Notably, the catalytic activity of the dimetallic centre is retained after its binding to the small protein lysozyme. Interestingly, this new artificial metalloenzyme conferred complete chemoselectivity to the oxidation of cyclic hydroxylamines, in contrast to the diruthenium catalyst.
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Evolving Artificial Metalloenzymes via Random Mutagenesis
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Nat. Chem. 2018, 10, 318-324, 10.1038/nchem.2927
Random mutagenesis has the potential to optimize the efficiency and selectivity of protein catalysts without requiring detailed knowledge of protein structure; however, introducing synthetic metal cofactors complicates the expression and screening of enzyme libraries, and activity arising from free cofactor must be eliminated. Here we report an efficient platform to create and screen libraries of artificial metalloenzymes (ArMs) via random mutagenesis, which we use to evolve highly selective dirhodium cyclopropanases. Error-prone PCR and combinatorial codon mutagenesis enabled multiplexed analysis of random mutations, including at sites distal to the putative ArM active site that are difficult to identify using targeted mutagenesis approaches. Variants that exhibited significantly improved selectivity for each of the cyclopropane product enantiomers were identified, and higher activity than previously reported ArM cyclopropanases obtained via targeted mutagenesis was also observed. This improved selectivity carried over to other dirhodium-catalysed transformations, including N–H, S–H and Si–H insertion, demonstrating that ArMs evolved for one reaction can serve as starting points to evolve catalysts for others.
Metal: RhLigand type: OAcHost protein: Prolyl oligopeptidase (POP) from P. furiosusAnchoring strategy: CovalentOptimization: Chemical & geneticNotes: Mutagenesis of the ArM by error-prone PCR
Metal: RhLigand type: OAcHost protein: Prolyl oligopeptidase (POP) from P. furiosusAnchoring strategy: CovalentOptimization: Chemical & geneticNotes: Mutagenesis of the ArM by error-prone PCR
Metal: RhLigand type: OAcHost protein: Prolyl oligopeptidase (POP) from P. furiosusAnchoring strategy: CovalentOptimization: Chemical & geneticNotes: Mutagenesis of the ArM by error-prone PCR
Metal: RhLigand type: OAcHost protein: Prolyl oligopeptidase (POP) from P. furiosusAnchoring strategy: CovalentOptimization: Chemical & geneticNotes: Mutagenesis of the ArM by error-prone PCR
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Generation of a Functional, Semisynthetic [FeFe]-Hydrogenase in a Photosynthetic Microorganism
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Energy Environ. Sci. 2018, 11, 3163-3167, 10.1039/C8EE01975D
[FeFe]-Hydrogenases are hydrogen producing metalloenzymes with excellent catalytic capacities, highly relevant in the context of a future hydrogen economy. Here we demonstrate the synthetic activation of a heterologously expressed [FeFe]-hydrogenase in living cells of Synechocystis PCC 6803, a photoautotrophic microbial chassis with high potential for biotechnological energy applications. H2-Evolution assays clearly show that the non-native, semi-synthetic enzyme links to the native metabolism in living cells.
Metal: FeHost protein: HydA1 ([FeFe]-hydrogenase) from C. reinhardtiiAnchoring strategy: ReconstitutionOptimization: Chemical & geneticNotes: ---
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Hybrid [FeFe]-Hydrogenases with Modified Active Sites Show Remarkable Residual Enzymatic Activity
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Biochemistry 2015, 54, 1474-1483, 10.1021/bi501391d
[FeFe]-hydrogenases are to date the only enzymes for which it has been demonstrated that the native inorganic binuclear cofactor of the active site Fe2(adt)(CO)3(CN)2 (adt = azadithiolate = [S-CH2-NH-CH2-S]2–) can be synthesized on the laboratory bench and subsequently inserted into the unmaturated enzyme to yield fully functional holo-enzyme (Berggren, G. et al. (2013) Nature 499, 66–70; Esselborn, J. et al. (2013) Nat. Chem. Biol. 9, 607–610). In the current study, we exploit this procedure to introduce non-native cofactors into the enzyme. Mimics of the binuclear subcluster with a modified bridging dithiolate ligand (thiodithiolate, N-methylazadithiolate, dimethyl-azadithiolate) and three variants containing only one CN– ligand were inserted into the active site of the enzyme. We investigated the activity of these variants for hydrogen oxidation as well as proton reduction and their structural accommodation within the active site was analyzed using Fourier transform infrared spectroscopy. Interestingly, the monocyanide variant with the azadithiolate bridge showed ∼50% of the native enzyme activity. This would suggest that the CN– ligands are not essential for catalytic activity, but rather serve to anchor the binuclear subsite inside the protein pocket through hydrogen bonding. The inserted artificial cofactors with a propanedithiolate and an N-methylazadithiolate bridge as well as their monocyanide variants also showed residual activity. However, these activities were less than 1% of the native enzyme. Our findings indicate that even small changes in the dithiolate bridge of the binuclear subsite lead to a rather strong decrease of the catalytic activity. We conclude that both the Brønsted base function and the conformational flexibility of the native azadithiolate amine moiety are essential for the high catalytic activity of the native enzyme.
Metal: FeHost protein: Apo-HydA1 ([FeFe]-hydrogenase) from C. reinhardtiiAnchoring strategy: DativeOptimization: ChemicalNotes: H2 evolution: TOF = 450 s-1. H2 oxidation: TOF = 150 s-1.
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Spontaneous Activation of [FeFe]-Hydrogenases by an Inorganic [2Fe] Active Site Mimic
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Nat. Chem. Biol. 2013, 9, 607-609, 10.1038/Nchembio.1311
Hydrogenases catalyze the formation of hydrogen. The cofactor ('H-cluster') of [FeFe]-hydrogenases consists of a [4Fe-4S] cluster bridged to a unique [2Fe] subcluster whose biosynthesis in vivo requires hydrogenase-specific maturases. Here we show that a chemical mimic of the [2Fe] subcluster can reconstitute apo-hydrogenase to full activity, independent of helper proteins. The assembled H-cluster is virtually indistinguishable from the native cofactor. This procedure will be a powerful tool for developing new artificial H2-producing catalysts.