5 publications
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A General Method for Artificial Metalloenzyme Formationthrough Strain-Promoted Azide–Alkyne Cycloaddition
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ChemBioChem 2014, 15, 223-227, 10.1002/cbic.201300661
Strain‐promoted azide–alkyne cycloaddition (SPAAC) can be used to generate artificial metalloenzymes (ArMs) from scaffold proteins containing a p‐azido‐L‐phenylalanine (Az) residue and catalytically active bicyclononyne‐substituted metal complexes. The high efficiency of this reaction allows rapid ArM formation when using Az residues within the scaffold protein in the presence of cysteine residues or various reactive components of cellular lysate. In general, cofactor‐based ArM formation allows the use of any desired metal complex to build unique inorganic protein materials. SPAAC covalent linkage further decouples the native function of the scaffold from the installation process because it is not affected by native amino acid residues; as long as an Az residue can be incorporated, an ArM can be generated. We have demonstrated the scope of this method with respect to both the scaffold and cofactor components and established that the dirhodium ArMs generated can catalyze the decomposition of diazo compounds and both SiH and olefin insertion reactions involving these carbene precursors.
Metal: RhLigand type: Poly-carboxylic acidHost protein: tHisFAnchoring strategy: CovalentOptimization: ---Notes: ---
Metal: RhLigand type: Poly-carboxylic acidHost protein: tHisFAnchoring strategy: CovalentOptimization: ---Notes: ---
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An Artificial Metalloenzyme: Creation of a Designed Copper Binding Site in a Thermostable Protein
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Angew. Chem. Int. Ed. 2010, 49, 5151-5155, 10.1002/anie.201002106
Guided by nature: A designed binding site comprising the His/His/Asp motif for CuII complexation has been constructed in a robust protein by site‐specific mutagenesis (see picture). The artificial metalloenzyme catalyzes an enantioselective Diels–Alder reaction.
Metal: CuLigand type: Amino acidHost protein: tHisFAnchoring strategy: DativeOptimization: GeneticNotes: ---
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Peroxidase Activity of an Antibody-Heme Complex
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J. Am. Chem. Soc. 1990, 112, 9414-9415, 10.1021/ja00181a065
The specificity and diversity of the immune system have recently been exploited in the generation of antibodies that catalyze a wide variety of chemical reactions.1·2 Several general strategies for the design of catalytic antibodies have emerged, including the use of antibody binding energy to enhance the chemical reactivity of a cofactor or to position a cofactor and a substrate in close proximity.3,4 An intriguing target for antibody-cofactor catalysis is the oxidative reactions characteristic of heme proteins. Here we report that antibodies specific for A-methylmesoporphyrin IX bind iron(III) mesoporphyrin IX and that the resulting complex catalyzes the oxidation of several substrates. These studies are a first step toward the development of selective antibody-heme monooxygenase catalysts.
Metal: FeLigand type: PorphyrinHost protein: Antibody7G12-A10-G1-A12Anchoring strategy: SupramolecularOptimization: ---Notes: ---
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Porous Protein Crystals as Catalytic Vessels for Organometallic Complexes
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Chem. - Asian J. 2014, 9, 1373-1378, 10.1002/asia.201301347
Porous protein crystals, which are protein assemblies in the solid state, have been engineered to form catalytic vessels by the incorporation of organometallic complexes. Ruthenium complexes in cross‐linked porous hen egg white lysozyme (HEWL) crystals catalyzed the enantioselective hydrogen‐transfer reduction of acetophenone derivatives. The crystals accelerated the catalytic reaction and gave different enantiomers based on the crystal form (tetragonal or orthorhombic). This method represents a new approach for the construction of bioinorganic catalysts from protein crystals.
Metal: RuLigand type: BenzeneHost protein: Lysozyme (crystal)Anchoring strategy: DativeOptimization: ---Notes: Tetragonal HEWL crystals
Metal: RuLigand type: BenzeneHost protein: Lysozyme (crystal)Anchoring strategy: DativeOptimization: ---Notes: Orthorhombic HEWL crystals
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Symmetry-Related Residues as Promising Hotspots for the Evolution of De Novo Oligomeric Enzymes
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Chem. Sci. 2021, 12, 5091-5101, 10.1039/d0sc06823c
Directed evolution has provided us with great opportunities and prospects in the synthesis of tailor-made proteins. It, however, often requires at least mid to high throughput screening, necessitating more effective strategies for laboratory evolution. We herein demonstrate that protein symmetry can be a versatile criterion for searching for promising hotspots for the directed evolution of de novo oligomeric enzymes. The randomization of symmetry-related residues located at the rotational axes of artificial metallo-β-lactamase yields drastic effects on catalytic activities, whereas that of non-symmetry-related, yet, proximal residues to the active site results in negligible perturbations. Structural and biochemical analysis of the positive hits indicates that seemingly trivial mutations at symmetry-related spots yield significant alterations in overall structures, metal-coordination geometry, and chemical environments of active sites. Our work implicates that numerous artificially designed and natural oligomeric proteins might have evolutionary advantages of propagating beneficial mutations using their global symmetry.
Metal: ZnLigand type: Amino acidHost protein: Metallo-β-lactamase (AB5)Anchoring strategy: DativeOptimization: GeneticNotes: kcat/KM value pver 80 min-1M-1