3 publications
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Biosynthesis of a Site-Specific DNA Cleaving Protein
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J. Am. Chem. Soc. 2008, 130, 13194-13195, 10.1021/ja804653f
An E. coli catabolite activator protein (CAP) has been converted into a sequence-specific DNA cleaving protein by genetically introducing (2,2′-bipyridin-5-yl)alanine (Bpy-Ala) into the protein. The mutant CAP (CAP-K26Bpy-Ala) showed comparable binding affinity to CAP-WT for the consensus operator sequence. In the presence of Cu(II) and 3-mercaptopropionic acid, CAP-K26Bpy-Ala cleaves double-stranded DNA with high sequence specificity. This method should provide a useful tool for mapping the molecular details of protein−nucleic acid interactions.
Metal: CuLigand type: BipyridineHost protein: Catabolite activator protein (CAP)Anchoring strategy: ---Optimization: Chemical & geneticNotes: Catabolite activator protein from E. coli
Metal: FeLigand type: BipyridineHost protein: Catabolite activator protein (CAP)Anchoring strategy: ---Optimization: Chemical & geneticNotes: Catabolite activator protein from E. coli
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Generation of a Hybrid Sequence-Specific Single Stranded Deoxyribonuclease
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Science 1987, 238, 1401-1403, 10.1126/science.3685986
The relatively nonspecific single-stranded deoxyribonuclease, staphylococcal nuclease, was selectively fused to an oligonucleotide binding site of defined sequence to generate a hybrid enzyme. A cysteine was substituted for Lys116 in the enzyme by oligonucleotide-directed mutagenesis and coupled to an oligonucleotide that contained a 3'-thiol. The resulting hybrid enzyme cleaved single-stranded DNA at sites adjacent to the oligonucleotide binding site.
Metal: CaLigand type: UndefinedHost protein: Staphylococcal nucleaseAnchoring strategy: ---Optimization: ---Notes: Engineered sequence specificity
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Peroxidase Activity of an Antibody-Heme Complex
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J. Am. Chem. Soc. 1990, 112, 9414-9415, 10.1021/ja00181a065
The specificity and diversity of the immune system have recently been exploited in the generation of antibodies that catalyze a wide variety of chemical reactions.1·2 Several general strategies for the design of catalytic antibodies have emerged, including the use of antibody binding energy to enhance the chemical reactivity of a cofactor or to position a cofactor and a substrate in close proximity.3,4 An intriguing target for antibody-cofactor catalysis is the oxidative reactions characteristic of heme proteins. Here we report that antibodies specific for A-methylmesoporphyrin IX bind iron(III) mesoporphyrin IX and that the resulting complex catalyzes the oxidation of several substrates. These studies are a first step toward the development of selective antibody-heme monooxygenase catalysts.
Metal: FeLigand type: PorphyrinHost protein: Antibody7G12-A10-G1-A12Anchoring strategy: SupramolecularOptimization: ---Notes: ---